Listening to ecosystems: New study published using acoustic monitoring to study Okinawa’s “Soundscape”

At every OKEON site there is a small green box attached to a tree. These boxes are acoustic monitors, and they are recording natural sounds almost constantly. As part of the OKEON project, we use these natural sound recordings, or “soundscapes”, as a way of monitoring biodiversity.

Sam Ross sets up an acoustic monitoring device at the OIST field site.

We collect more than 1 terabyte of audio data every week. If you wanted to listen to all of the recordings we’ve made so far, it would take you about 8 years… if you listened all day and never went to sleep. To sort through all this audio data, we use two approaches. First, we break the sounds up into sounds at different frequencies (i.e., pitch). This lets us get a big picture view of when and where animals are active on Okinawa. Second, we use machine learning to train our computers to detect species in which we are interested. This helps us understand more about which particular species are in each area of the island, and how their behavior varies across the year.

In many parts of Okinawa, humans and nature live close together. Managing this interaction is important for preserving wild populations of plants and animals.

Ultimately, our project aims to understand the ways that human activity affects Okinawa’s wildlife, and how we can better protect these species in the future. For more information (including videos), please see the OIST press release. A link to the study can be found here.

New paper on 3D ant systematics

We have a new paper out today in ZooKeys revising the doryline genus Zasphinctus in the Afrotropical region. Led by Paco Hita Garcia, we do a deep dive into using microCT and 3D data for ant taxonomy. In previous recent papers, we provided 3D models and virtual type specimens to support taxonomic work. Here we go further and exploit more fully the power of micro-CT to discover and examine characters useful for systematics and the 3D representation of virtual specimens.

The three species are named after three important figures in biodiversity conservation. We named one after former US President Barack Obama, for his role in protecting natural areas. The species was found within a few kilometers of Obama’s father’s village in Kenya. The second species was named after E.O. Wilson, discovered from Gorongosa National Park, Mozambique, where he and his foundation have done a lot of work over recent years. The third species is named after Nigerian environmental activist Ken Saro-Wiwa.

Read the paper.

Interact with the 3D models on Sketchfab.

OIST media release.

 

 

New paper on evolution of ant spinescence in Pheidole

A new paper from the lab was published today in the Biological Journal of the Linnean Society focusing on aberrant spinescent phenotypes in Pheidole (including the famous dragon ants). We look at spinescence from a number of angles including phylogenetic, ecological, geographic, and 3D morphology. This study sheds light on the complexity of the issue of spine phenotype evolution. There are a number of open questions and some big mysteries. For starters, why the heck has spinescence evolved so many times in the Indo-Pacific, but no spiny Pheidole in New World? Check out the paper here!

 

 

 

 

Chillier Winters, Smaller Beaks

This honeyeater (Melidectes belfordi) lives in the montane forests of New Guinea. Photo credit: Charles Davies; Flickr. This photo was cropped from the original version.

(Article provided by the OIST media section)

Although Charles Darwin lived and worked in the 19th century, modern evolutionary biologists are far from exhausting all avenues of inquiry regarding birds and evolution. For example, in the 1990s, researchers such as Russ Greenberg, ornithologist from the Smithsonian Institution in the United States, began to explore a new question concerning the relationship between climate and the evolution of beak size. This question was inspired by Allen’s Rule, which states that warm-blooded animals living in cold climates will have shorter limbs and appendages than those that live in warmer climates. The biological mechanism behind this rule is thermoregulation—more body surface area helps animals to shed heat better whereas less surface area helps them to conserve it. Since a bird’s beak plays a large role in thermoregulation—it has lots of blood vessels and is not covered in feathers—researchers wondered whether hotter climates beget larger beaks and colder climates beget smaller ones. Indeed, studies revealed that climate has influenced beak size, but not which type of climate had more of an overall impact.

Past research left a question open at the end: “Which of these functions is under selection?” Dr. Nicholas Ryan Friedman, a researcher from the Biodiversity and Biocomplexity Unit at the Okinawa Institute of Science and Technology Graduate University (OIST), comments. “Are birds with small beaks dying in the summer because they get too hot? Or are birds with large beaks dying in the winter because they get too cold?” In collaboration with scientists in the Czech Republic, Dr. Friedman designed a study to explore this question and ultimately found that winter, not summer, had more of an impact. The study is published the journal Evolution.

Dr. Friedman and colleagues chose to tackle the question by recording variations in beak size in Australasian honeyeaters and allies. What makes this group of birds a great subject for this study is that the region they inhabit, Australia, New Guinea, and the South Pacific, exhibits huge variation in climate and temperature—from the tropical forests of New Guinea, to central Australia’s arid deserts, to the temperate forests of Tasmania. This means that it is possible to compare differences between individuals of the same species that are living in wildly different conditions.

After measuring the beaks from 158 different species using specimens from the Australian National Wildlife Collection and comparing beak sizes to climate, the researchers found no correlation with summer temperatures but a clear one for winter—the coldest winters were associated with the smallest beaks, whereas warmer winters were associated with larger beaks.

The top graph shows a correlation between beak size and winter minimum temperatures, with the smallest beaks relating to the coldest winters. The bottom graph shows no clear correlation for summer maximum temperatures.

Before Dr. Friedman and colleagues reported this new environmental pressure on beak size, winter temperatures, feeding habits were believed to be the greatest driving force in beak evolution. For example, since the 1970s, Peter and Rosemary Grant, the famous duo who measured the process of evolution in real-time in the Galapagos, have been studying how beak size can change due to food availability over a short period.

“Which is exciting!” Dr. Friedman comments. “But it’s not yet clear from that whether adaptation to improve feeding efficiency is the only, or even the most important, factor in driving beak evolution across millions of years.”

What is unique about Dr. Friedman and colleagues’ study is that it allowed for a peek into an unusually broad evolutionary timeframe. By comparing many different species of birds, the researchers were able to delve into a very distant past and discover the morphological importance of winter temperatures. The next step would be to better understand the relationship between these two factors—feeding efficiency and winter temperatures—in the overall narrative of beak evolution.

The Helmeted Friarbird (Philemon buceroides), a member of the honeyeaters, lives in Northern Australia and New Guinea. Photo credit: Jim Bendon; Flickr.

By Anne McGovern (media@oist.jp)

The dragon ant makes it into the Top10 New Species of 2017

Pheidole drogon major worker

Since 2008, the International Institute for Species Exploration in New York, USA publishes an annual Top 10 list of the new species discovered the past year. The annual list is released around May 23 to honor of the birthday of Carl Linnaeus, also known as the Father of Taxonomy.

Amidst a rat, a worm, a stingray, two plants and other arthropods, the dragon ant Pheidole drogon that was described last year by researchers in our lab made the cut to the 2017 Top 10.

Along with Pheidole viserion, Pheidole drogon – found in Papua New Guinea – owes its name to the dragon in the famed Game of Thrones book and TV series. The idea was inspired from the large spines on the back of the ant, which is revealed to be a location for muscle attachment to allow great strength in the head and mandibles.

The 2017 list of nominees also includes the bleeding ‘Bloodybone’ bush tomato, the spider Eriovixia gryffindori resembling the ‘Sorting Hat’ in the Harry Potter series, an amphibious centipede, a marine worm that look like a churro fried pastry, a South American plant which flower looks like a “Devil head”, a large spotted freshwater stingray, a millipede that continuously adds extra limbs throughout its lifetime, a vegetable-eating rat and finally a leaf-like katydid.

The institute’s international committee of taxonomists selects the Top 10 from among the approximately 18,000 new species named the previous year.

Pheidole drogon minor worker

Written by the OIST Media Section, edited by Julia Janicki.