Lab retreat to Iheya


Our lab decided to take a trip to Iheya island the second week of December 2017, in order to explore different parts of Okinawa, but also to celebrate the end of Cong’s PhD defense and Yuka’s proposal defense.

The island is full of goats and sculptures made from marine debris. We also visited a cave, a beach, hiked to the top of a small mountain, and had some good food and drinks.


Nick (our post-doc who does a lot of research on acoustics and birds) also did some bird watching on the island, and below is a list of birds he saw on Iheya:

Eurasian Teal
Suzume
Hiyodori
Chinese Turtle Dove
Japanese Bush Warbler
Pale Thrush
Blue Rock Thrush
Japanese White-eye
Grey faced Buzzard
Japanese Sparrowhawk
Japanese Wood Pigeon
Little Grebe
Great grey egret
Osprey
Little egret
Pacific Swallow
Intermediate Egret
Zitting Cisticola
Daurian Redstart
Tufted Duck

Apart from bird watching, Takuma (our technician leading the field team who is a great taxonomist) also collected insects during our hike.

Until next time, Iheya!

(Most images taken by Cong Liu)

Listening to ecosystems: New study published using acoustic monitoring to study Okinawa’s “Soundscape”

At every OKEON site there is a small green box attached to a tree. These boxes are acoustic monitors, and they are recording natural sounds almost constantly. As part of the OKEON project, we use these natural sound recordings, or “soundscapes”, as a way of monitoring biodiversity.

Sam Ross sets up an acoustic monitoring device at the OIST field site.

We collect more than 1 terabyte of audio data every week. If you wanted to listen to all of the recordings we’ve made so far, it would take you about 8 years… if you listened all day and never went to sleep. To sort through all this audio data, we use two approaches. First, we break the sounds up into sounds at different frequencies (i.e., pitch). This lets us get a big picture view of when and where animals are active on Okinawa. Second, we use machine learning to train our computers to detect species in which we are interested. This helps us understand more about which particular species are in each area of the island, and how their behavior varies across the year.

In many parts of Okinawa, humans and nature live close together. Managing this interaction is important for preserving wild populations of plants and animals.

Ultimately, our project aims to understand the ways that human activity affects Okinawa’s wildlife, and how we can better protect these species in the future. For more information (including videos), please see the OIST press release. A link to the study can be found here.

New paper on 3D ant systematics

We have a new paper out today in ZooKeys revising the doryline genus Zasphinctus in the Afrotropical region. Led by Paco Hita Garcia, we do a deep dive into using microCT and 3D data for ant taxonomy. In previous recent papers, we provided 3D models and virtual type specimens to support taxonomic work. Here we go further and exploit more fully the power of micro-CT to discover and examine characters useful for systematics and the 3D representation of virtual specimens.

The three species are named after three important figures in biodiversity conservation. We named one after former US President Barack Obama, for his role in protecting natural areas. The species was found within a few kilometers of Obama’s father’s village in Kenya. The second species was named after E.O. Wilson, discovered from Gorongosa National Park, Mozambique, where he and his foundation have done a lot of work over recent years. The third species is named after Nigerian environmental activist Ken Saro-Wiwa.

Read the paper.

Interact with the 3D models on Sketchfab.

OIST media release.

 

 

New paper on evolution of ant spinescence in Pheidole

A new paper from the lab was published today in the Biological Journal of the Linnean Society focusing on aberrant spinescent phenotypes in Pheidole (including the famous dragon ants). We look at spinescence from a number of angles including phylogenetic, ecological, geographic, and 3D morphology. This study sheds light on the complexity of the issue of spine phenotype evolution. There are a number of open questions and some big mysteries. For starters, why the heck has spinescence evolved so many times in the Indo-Pacific, but no spiny Pheidole in New World? Check out the paper here!

 

 

 

 

OKEON Churamori Project Symposium 2017


On Saturday, July 29th, many collaborators of the OKEON Churamori Project along with the general public gathered at OIST to attend the OKEON Churamori Project Symposium 2017. This event was the project’s first symposium and it was a great success, with over 170 attendees, interesting and informative talks, a panel discussion, and a post-symposium gathering that included hands-on exhibitions and a poster session where participants were able to exchange ideas.